Mike is a leader in genome bioinformatics with world-class expertise in genomics, data science, and software engineering. Operating independently from Honolulu & always open to new collaborations!

Prior affiliations: DNAnexus, Kellis lab, Broad Inst, MIT EECS

Get in touch: **TwitterGitHubLinkedInGoogle Scholar**

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Selected works

R&D

GenomicSQLite genome indexing & compression for the embedded RDBMS

iitii learned index structure for genomic intervals

spVCF storage for variant call sets on 1M+ genomes

Production

miniwdl bioinformatics workflow runner & dev toolkit

GLnexus scalable joint variant calling

htsget GA4GH API for web access to genomic datasets

Classics

PhyloCSF protein-coding evolutionary signatures in cross-species alignments

mlin.net freeware Windows utilities since 1999

Signing address with ≥1.00ETH: 0x83Cee747E4BCFF80938eA1056F925d1c24412f0b